Publications

This page lists all publications of current and former members of our department. The recent articles are listed by year.

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U. Bazylińska, D. Wawrzyńczyk, A. Szewczyk and J. Kulbacka, Engineering and biological assessment of double core nanoplatform for co-delivery of hybrid fluorophores to human melanoma, Journal of Inorganic Biochemistry, 2020, 208, 111088. Cite
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J. Kulbacka, A. Choromańska, M. Drąg-Zalesińska, P. Nowak, D. Baczyńska, M. Kotulska, I. Bednarz-Misa, J. Saczko and A. Chwiłkowska, Proapoptotic activity induced by photodynamic reaction with novel cyanine dyes in caspase-3-deficient human breast adenocarcinoma cell lines (MCF/WT and MCF/DX), Photodiagnosis and Photodynamic Therapy, 2020, 30, 101775. Cite
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J. Iwanejko, M. Sowiński, E. Wojaczyńska, T. K. Olszewski and M. Górecki, An approach to new chiral bicyclic imines and amines via Horner–Wadsworth–Emmons reaction, RSC Adv., 2020, 10, 14618–14629. Cite
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A. Łupicka-Słowik, M. Psurski, R. Grzywa, M. Cuprych, J. Ciekot, W. Goldeman, E. Wojaczyńska, J. Wojaczyński, J. Oleksyszyn and M. Sieńczyk, Structure-based design, synthesis, and evaluation of the biological activity of novel phosphoroorganic small molecule IAP antagonists, Invest New Drugs, , DOI:10.1007/s10637-020-00923-4. Cite
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C. Bihanic, K. Richards, T. K. Olszewski and C. Grison, Eco-Mn Ecocatalysts: Toolbox for Sustainable and Green Lewis Acid Catalysis and Oxidation Reactions, ChemCatChem, 2020, 12, 1529–1545. Cite
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P. Ordon, L. Komorowski, M. Jędrzejewski and J. Zaklika, The Connectivity Matrix: A Toolbox for Monitoring Bonded Atoms and Bonds, J. Phys. Chem. A, 2020, 124, 1076–1086. Cite
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P. Ordon, J. Zaklika, M. Jędrzejewski and L. Komorowski, Bond Softening Indices Studied by the Fragility Spectra for Proton Migration in Formamide and Related Structures, J. Phys. Chem. A, 2020, 124, 328–338. Cite
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M. Samadaei, M. Pinter, D. Senfter, S. Madlener, N. Rohr-Udilova, D. Iwan, K. Kamińska, E. Wojaczyńska, J. Wojaczyński and A. Kochel, Synthesis and Cytotoxic Activity of Chiral Sulfonamides Based on the 2-Azabicycloalkane Skeleton, Molecules, 2020, 25, 2355. Cite
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J. Iwanejko, E. Wojaczyńska, E. Turlej, M. Maciejewska and J. Wietrzyk, Octahydroquinoxalin-2(1H)-One-Based Aminophosphonic Acids and Their Derivatives—Biological Activity towards Cancer Cells, Materials, 2020, 13, 2393. Cite
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C.-K. Lim, M. Maldonado, R. Zalesny, R. Valiev, H. Ågren, A. S. L. Gomes, J. Jiang, R. Pachter and P. N. Prasad, Interlayer-Sensitized Linear and Nonlinear Photoluminescence of Quasi-2D Hybrid Perovskites Using Aggregation-Induced Enhanced Emission Active Organic Cation Layers, Advanced Functional Materials, 2020, 30, 1909375. Cite
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T. N. Moshkina, E. V. Nosova, A. E. Kopotilova, G. N. Lipunova, M. S. Valova, L. K. Sadieva, D. S. Kopchuk, P. A. Slepukhin, R. Zaleśny, B. Ośmiałowski and V. N. Charushin, Synthesis and Photophysical Studies of Novel V-Shaped 2,3-Bis5-aryl-2-thienyl(dibenzo[f,h])quinoxalines, Asian Journal of Organic Chemistry, 2020, 9, 673–681. Cite
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A. M. Grabarz, B. Jędrzejewska, A. Skotnicka, N. A. Murugan, F. Patalas, W. Bartkowiak, D. Jacquemin and B. Ośmiałowski, The impact of the heteroatom in a five-membered ring on the photophysical properties of difluoroborates, Dyes Pigm., 2019, 170, 107481. Cite
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K. Kinastowska, J. Liu, J. M. Tobin, Y. Rakovich, F. Vilela, Z. Xu, W. Bartkowiak and M. Grzelczak, Photocatalytic cofactor regeneration involving triethanolamine revisited: The critical role of glycolaldehyde, Appl. Catal. B, 2019, 243, 686–692. Cite
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M. Chołuj and W. Bartkowiak, Electric properties of molecules confined by the spherical harmonic potential, Int. J. Quantum Chem, 2019, 119, e25997. Cite
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E. Wolińska, K. Hałdys, J. Góra, T. K. Olszewski, B. Boduszek and R. Latajka, Phosphonic and Phosphinic Acid Derivatives as Novel Tyrosinase Inhibitors: Kinetic Studies and Molecular Docking, Chemistry and Biodiversity, , DOI:10.1002/cbdv.201900167. Cite
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Ł. Gułajski, A. Tracz, K. Urbaniak, S. J. Czarnocki, M. Bieniek and T. K. Olszewski, Ammonium-tagged ruthenium-based catalysts for olefin metathesis in aqueous media under ultrasound and microwave irradiation, Beilstein Journal of Organic Chemistry, 2019, 15, 160–166. Cite
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J. Iwanejko, A. Brol, B. M. Szyja, M. Daszkiewicz, E. Wojaczyńska and T. K. Olszewski, Aminophosphonates and aminophosphonic acids with tetrasubstituted stereogenic center: Diastereoselective synthesis from cyclic ketimines, Organic and Biomolecular Chemistry, 2019, 17, 7352–7359. Cite
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T. K. Olszewski, P. Adler and C. Grison, Bio-based catalysts from biomass issued after decontamination of effluents rich in copper— an innovative approach towards greener copper-based catalysis, Catalysts, , DOI:10.3390/catal9030214. Cite
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J. Iwanejko, A. Brol, B. Szyja, M. Daszkiewicz, E. Wojaczyńska and T. K. Olszewski, Hydrophosphonylation of chiral hexahydroquinoxalin-2(1H)-one derivatives as an effective route to new bicyclic compounds: Aminophosphonates, enamines and imines, Tetrahedron, 2019, 75, 1431–1439. Cite
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A. Stanovych, M. Balloy, T. K. Olszewski, E. Petit and C. Grison, Depollution of mining effluents: innovative mobilization of plant resources, Environmental Science and Pollution Research, 2019, 26, 19327–19334. Cite
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C. De Laet, T. K. Olszewski and C. Grison, Melliferous potential of Mentha aquatica, Journal of Apicultural Research, 2019, 58, 714–719. Cite
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E. Żymańczyk-Duda, N. Dunal, M. Brzezińska-Rodak, A. Osiewała, T. K. Olszewski, M. Klimek-Ochab and M. A. Serafin-Lewańczuk, First biological conversion of chiral heterophosphonate derivative - scaling and paths of conversion discussion /, Bioorganic Chemistry., , DOI:10.1016/j.bioorg.2019.01.047. Cite
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J. Zaklika, L. Komorowski and P. Ordon, Evolution of the atomic valence observed by the reaction fragility spectra on the reaction path, Journal of molecular modeling, 2019, 25, 134. Cite
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J. Zaklika, L. Komorowski and P. Ordon, Bond Fragility Spectra for the Double Proton-Transfer Reaction in the Formic Acid-Type Dimers, Journal of Physical Chemistry A, 2019, 123, 4274–4283. Cite
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Ż. A. Ignatiuk, M. J. Janicki, R. W. Góra, K. Konieczny and R. Kowalczyk, Applications of Thermal Activation, Ball-milling and Aqueous Medium in Stereoselective Michael Addition of Nitromethane to Enynones Catalyzed by Chiral Squaramides, Adv. Synth. Catal., 2019, 361, 1108–1116. Cite
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O. Loboda, P. Strizhak, R. W. Góra and C. Cervinka, Editorial: Fragment-based electronic structure methods for solids, Frontiers in Chemistry. Cite
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Ż. A. Mała, M. J. Janicki, R. W. Góra, K. A. Konieczny and R. Kowalczyk, Mechanochemical Assisted Chemoselective and Stereoselective Hydrogen-Bonding Catalyzed Addition of Dithiomalonates to Enones, Advanced Synthesis & Catalysis, , DOI:10.1002/adsc.202300636. Cite
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M. J. Janicki, R. Szabla, J. Šponer and R. W. Góra, Photoinduced water–chromophore electron transfer causes formation of guanosine photodamage, Phys. Chem. Chem. Phys., 2022, 24, 8217–8224. Cite
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M. J. Janicki, C. L. Kufner, Z. R. Todd, S. C. Kim, D. K. O'Flaherty, J. W. Szostak, J. Šponer, R. W. Góra, D. D. Sasselov and R. Szabla, Ribose Alters the Photochemical Properties of the Nucleobase in Thionated Nucleosides, J. Phys. Chem. Lett., 2021, 6707–6713. Cite
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B. Błasiak, W. Bartkowiak and R. W. Góra, An effective potential for Frenkel excitons, Phys. Chem. Chem. Phys., 2021, 23, 1923–1935. Cite
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J. Jankowska and R. W. Góra, Ultrafast nonradiative deactivation of photoexcited 8-oxo-hypoxanthine: a nonadiabatic molecular dynamics study, Phys. Chem. Chem. Phys., 2021, 23, 1234–1241. Cite
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B. Błasiak, J. D. Bednarska, M. Chołuj, R. W. Góra and W. Bartkowiak, Ab initio effective one-electron potential operators: Applications for charge-transfer energy in effective fragment potentials, J. Comput. Chem., 2021, 42, 398–411. Cite
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Ż. A. Mała, M. J. Janicki, N. H. Niedźwiecka, R. W. Góra, K. A. Konieczny and R. Kowalczyk, Stereoselectivity Enhancement During the Generation of Three Contiguous Stereocenters in Tetrahydrothiophenes, ChemCatChem, 2021, 13, 574–580. Cite
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M. Chołuj, B. Błasiak and W. Bartkowiak, Partitioning of the interaction-induced polarizability of molecules in helium environments, International Journal of Quantum Chemistry, 2021, n/a, e26544. Cite
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N. A. Murugan and R. Zaleśny, Multiscale Modeling of Two-Photon Probes for Parkinson's Diagnostics Based on Monoamine Oxidase B Biomarker, J. Chem. Inf. Model., 2020, 60, 3854–3863. Cite
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C. R. Baiz, B. Błasiak, J. Bredenbeck, M. Cho, J.-H. Choi, S. A. Corcelli, A. G. Dijkstra, C.-J. Feng, S. Garrett-Roe, N.-H. Ge, M. W. D. Hanson-Heine, J. D. Hirst, T. L. C. Jansen, K. Kwac, K. J. Kubarych, C. H. Londergan, H. Maekawa, M. Reppert, S. Saito, S. Roy, J. L. Skinner, G. Stock, J. E. Straub, M. C. Thielges, K. Tominaga, A. Tokmakoff, H. Torii, L. Wang, L. J. Webb and M. T. Zanni, Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction, Chem. Rev., 2020, 120, 7152–7218. Cite
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R. Zaleśny, M. M. Alam, P. N. Day, K. A. Nguyen, R. Pachter, C.-K. Lim, P. N. Prasad and H. Ågren, Computational design of two-photon active organic molecules for infrared responsive materials, J. Mater. Chem. C, 2020, 8, 9867–9873. Cite
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B. Ośmiałowski, E. F. Petrusevich, M. A. Antoniak, I. Grela, M. A. Bin Jassar, M. Nyk, J. M. Luis, B. Jędrzejewska, R. Zaleśny and D. Jacquemin, Controlling Two-Photon Action Cross Section by Changing a Single Heteroatom Position in Fluorescent Dyes, J. Phys. Chem. Lett., 2020, 5920–5925. Cite
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U. Bazylińska, D. Wawrzyńczyk, A. Szewczyk and J. Kulbacka, Engineering and biological assessment of double core nanoplatform for co-delivery of hybrid fluorophores to human melanoma, Journal of Inorganic Biochemistry, 2020, 208, 111088. Cite
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D. C. Mayer, J. K. Zarȩba, G. Raudaschl-Sieber, A. Pöthig, M. Chołuj, R. Zaleśny, M. Samoć and R. A. Fischer, Postsynthetic Framework Contraction Enhances the Two-Photon Absorption Properties of Pillar-Layered Metal–Organic Frameworks, Chem. Mater., , DOI:10.1021/acs.chemmater.0c01417. Cite
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J. Kulbacka, A. Choromańska, M. Drąg-Zalesińska, P. Nowak, D. Baczyńska, M. Kotulska, I. Bednarz-Misa, J. Saczko and A. Chwiłkowska, Proapoptotic activity induced by photodynamic reaction with novel cyanine dyes in caspase-3-deficient human breast adenocarcinoma cell lines (MCF/WT and MCF/DX), Photodiagnosis and Photodynamic Therapy, 2020, 30, 101775. Cite
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J. Xu, V. Chmela, N. J. Green, D. A. Russell, M. J. Janicki, R. W. Góra, R. Szabla, A. D. Bond and J. D. Sutherland, Selective prebiotic formation of RNA pyrimidine and DNA purine nucleosides, Nature, 2020, 582, 60–66. Cite
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J. Iwanejko, M. Sowiński, E. Wojaczyńska, T. K. Olszewski and M. Górecki, An approach to new chiral bicyclic imines and amines via Horner–Wadsworth–Emmons reaction, RSC Adv., 2020, 10, 14618–14629. Cite
1
A. Łupicka-Słowik, M. Psurski, R. Grzywa, M. Cuprych, J. Ciekot, W. Goldeman, E. Wojaczyńska, J. Wojaczyński, J. Oleksyszyn and M. Sieńczyk, Structure-based design, synthesis, and evaluation of the biological activity of novel phosphoroorganic small molecule IAP antagonists, Invest New Drugs, , DOI:10.1007/s10637-020-00923-4. Cite
1
C. Bihanic, K. Richards, T. K. Olszewski and C. Grison, Eco-Mn Ecocatalysts: Toolbox for Sustainable and Green Lewis Acid Catalysis and Oxidation Reactions, ChemCatChem, 2020, 12, 1529–1545. Cite
1
P. Ordon, L. Komorowski, M. Jędrzejewski and J. Zaklika, The Connectivity Matrix: A Toolbox for Monitoring Bonded Atoms and Bonds, J. Phys. Chem. A, 2020, 124, 1076–1086. Cite
1
P. Ordon, J. Zaklika, M. Jędrzejewski and L. Komorowski, Bond Softening Indices Studied by the Fragility Spectra for Proton Migration in Formamide and Related Structures, J. Phys. Chem. A, 2020, 124, 328–338. Cite
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J. M. Schmidt-Engler, L. Blankenburg, B. Błasiak, L. J. G. W. van Wilderen, M. Cho and J. Bredenbeck, Vibrational Lifetime of the SCN Protein Label in H2O and D2O Reports Site-Specific Solvation and Structure Changes During PYP's Photocycle, Anal. Chem., 2020, 92, 1024–1032. Cite
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M. Samadaei, M. Pinter, D. Senfter, S. Madlener, N. Rohr-Udilova, D. Iwan, K. Kamińska, E. Wojaczyńska, J. Wojaczyński and A. Kochel, Synthesis and Cytotoxic Activity of Chiral Sulfonamides Based on the 2-Azabicycloalkane Skeleton, Molecules, 2020, 25, 2355. Cite
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J. Iwanejko, E. Wojaczyńska, E. Turlej, M. Maciejewska and J. Wietrzyk, Octahydroquinoxalin-2(1H)-One-Based Aminophosphonic Acids and Their Derivatives—Biological Activity towards Cancer Cells, Materials, 2020, 13, 2393. Cite
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K. E. Szkaradek, P. Stadlbauer, J. Šponer, R. W. Góra and R. Szabla, UV-induced hydrogen transfer in DNA base pairs promoted by dark nπ* states, Chem. Commun., 2020, 56, 201–204. Cite
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M. Medved', A. Iglesias-Reguant, H. Reis, R. W. Góra, J. M. Luis and R. Zaleśny, Partitioning of interaction-induced nonlinear optical properties of molecular complexes. II. Halogen-bonded systems, Phys. Chem. Chem. Phys., 2020, 22, 4225–4234. Cite
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O. Olejnik, A. Masek and A. Kiersnowski, Thermal analysis of aliphatic polyester blends with natural antioxidants, Polymers, , DOI:10.3390/polym12010074. Cite
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C.-K. Lim, M. Maldonado, R. Zalesny, R. Valiev, H. Ågren, A. S. L. Gomes, J. Jiang, R. Pachter and P. N. Prasad, Interlayer-Sensitized Linear and Nonlinear Photoluminescence of Quasi-2D Hybrid Perovskites Using Aggregation-Induced Enhanced Emission Active Organic Cation Layers, Advanced Functional Materials, 2020, 30, 1909375. Cite
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T. N. Moshkina, E. V. Nosova, A. E. Kopotilova, G. N. Lipunova, M. S. Valova, L. K. Sadieva, D. S. Kopchuk, P. A. Slepukhin, R. Zaleśny, B. Ośmiałowski and V. N. Charushin, Synthesis and Photophysical Studies of Novel V-Shaped 2,3-Bis5-aryl-2-thienyl(dibenzo[f,h])quinoxalines, Asian Journal of Organic Chemistry, 2020, 9, 673–681. Cite
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E. Wojaczyńska and J. Wojaczyński, Modern Stereoselective Synthesis of Chiral Sulfinyl Compounds, Chemical Reviews, , DOI:10.1021/acs.chemrev.0c00002. Cite
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F. Steppeler, D. Iwan, E. Wojaczyńska and J. Wojaczyński, Chiral thioureas-preparation and significance in asymmetric synthesis and medicinal chemistry, Molecules, , DOI:10.3390/molecules25020401. Cite
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D. Majumdar, P. N. Samanta, S. Roszak, M. T. Nguyen and J. Leszczynski, Jahn-Teller and Pseudo Jahn-Teller Effects: Influences on the Electronic Structures of Small Transition, Main Group and Mixed Metal Clusters, Structural Chemistry, 2020, 31, 7–23. Cite
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P. N. Samanta, D. Majumdar, S. Roszak and J. Leszczynski, First-Principles Approach for Assessing Cold Electron Injection Efficiency of Dye-Sensitized Solar Cell: Elucidation of Mechanism of Charge Injection and Recombination, Journal of Physical Chemistry C, 2020, 124, 2817–2836. Cite
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M. Bulka, E. Jastrzebska, U. Bazylinska, A. Dybko, M. Chudy, K. A. Wilk and Z. Brzozka, 2020, pp. 1001–1002. Cite
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A. Zuchowska, K. Marciniak, E. Jastrzebska, U. Bazylińska, M. Chudy, A. Dybko, K. A. Wilk and Z. Brzozka, 2020, pp. 1021–1022. Cite
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A. M. Grabarz, B. Jędrzejewska, A. Skotnicka, N. A. Murugan, F. Patalas, W. Bartkowiak, D. Jacquemin and B. Ośmiałowski, The impact of the heteroatom in a five-membered ring on the photophysical properties of difluoroborates, Dyes Pigm., 2019, 170, 107481. Cite
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R. Zaleśny, N. Szczotka, A. Grabarz, B. Ośmiałowski and D. Jacquemin, Design of Two-Photon-Excited Fluorescent Dyes Containing Fluoroborylene Groups, ChemPhotoChem, 2019, 3, 719–726. Cite
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J. Kozłowska, P. Lipkowski, A. Roztoczyńska and W. Bartkowiak, DFT and spatial confinement: a benchmark study on the structural and electrical properties of hydrogen bonded complexes, Phys. Chem. Chem. Phys., 2019, 21, 17253–17273. Cite
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R. Zaleśny, M. Medved', S. P. Sitkiewicz, E. Matito and J. M. Luis, Can Density Functional Theory Be Trusted for High-Order Electric Properties? The Case of Hydrogen-Bonded Complexes, J. Chem. Theory Comput., 2019, 15, 3570–3579. Cite
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D. Wiczew, A. Borowska, K. Szkaradek, T. Biegus, K. Wozniak, M. Pyclik, M. Sitarska, L. Jaszewski, L. Radosinski, B. Hanus-Lorenz and S. Kraszewski, Molecular mechanism of vSGLT inhibition by gneyulin reveals antiseptic properties against multidrug-resistant gram-negative bacteria, J Mol Model, 2019, 25, 186. Cite
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K. Kinastowska, J. Liu, J. M. Tobin, Y. Rakovich, F. Vilela, Z. Xu, W. Bartkowiak and M. Grzelczak, Photocatalytic cofactor regeneration involving triethanolamine revisited: The critical role of glycolaldehyde, Appl. Catal. B, 2019, 243, 686–692. Cite
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L. Blankenburg, L. Schroeder, F. Habenstein, B. Błasiak, T. Kottke and J. Bredenbeck, Following local light-induced structure changes and dynamics of the photoreceptor PYP with the thiocyanate IR label, Phys. Chem. Chem. Phys., 2019, 21, 6622–6634. Cite
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T. Hrivnák, Š. Budzák, H. Reis, R. Zaleśny, P. Carbonnière and M. Medveď, Electric properties of hydrated uracil: From micro- to macrohydration, Journal of Molecular Liquids, 2019, 275, 338–346. Cite
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U. Bazylińska, J. Kulbacka and G. Chodaczek, Nanoemulsion structural design in co-encapsulation of hybrid multifunctional agents: Influence of the smart plga polymers on the nanosystem-enhanced delivery and electro-photodynamic treatment, Pharmaceutics, , DOI:10.3390/pharmaceutics11080405. Cite
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K. Tokarska, U. Bazylinska, E. Jastrzebska, M. Chudy, A. Dybko, K. A. Wilk and Z. Brzozka, Selective cancer-killing ability of new efficient porphyrin-based nanophotosensitizer in Lab-on-a-chip system, Sensors and Actuators, B: Chemical, 2019, 282, 665–674. Cite
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D. Wawrzyńczyk, B. Cichy, J. K. Zarȩba and U. Bazylińska, On the interaction between up-converting NaYF4:Er3+,Yb3+ nanoparticles and Rose Bengal molecules constrained within the double core of multifunctional nanocarriers, Journal of Materials Chemistry C, 2019, 7, 15021–15034. Cite